Stem-loop efu-mir-202

Accession

MI0028744

Description

Eptesicus fuscus efu-mir-202 precursor miRNA

Sequence

108948 reads, 2278.0 reads per million, 8 experiments

ugguuccuuuUUCCUAUGCAUAUACUUCUUUgagggucuggccUAAAGAGGUGUAAGGCAUGGGAAAAuggggcggcg
..(((((.(((((((((((.(((((((((((.(((......))))))))))))))..))))))))))).)))))....

Structure

--ug     u           -A           g   gu 
    guucc uuUUCCUAUGC  UAUACUUCUUU agg  c
    ||||| |||||||||||  ||||||||||| |||   
    cgggg AAAAGGGUACG  AUGUGGAGAAA Ucc  u
gcgg     u           GA           -   gg 

Annotation confidence High

Genome context

JH977636.1: 17707843-17707920 [+]

Mature efu-miR-202-5p

• Accession: MIMAT0058840
• Description: Eptesicus fuscus efu-miR-202-5p mature miRNA
• Sequence: 11 - UUCCUAUGCAUAUACUUCUUU - 31
• Evidence: experimental ; Illumina [1]

Mature efu-miR-202-3p

• Accession: MIMAT0035057
• Description: Eptesicus fuscus efu-miR-202-3p mature miRNA
• Sequence: 44 - UAAAGAGGUGUAAGGCAUGGGAAAA - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545