Stem-loop efu-mir-214

Accession

MI0028768

Description

Eptesicus fuscus efu-mir-214 precursor miRNA

Sequence

1323 reads, 97.0 reads per million, 4 experiments

gucaugugucUGCCUGUCUACACUUGCUGUGCAGAacauccgcucaccugUACAGCAGGCACAGACAGGCAGUcacaugacaa
((((((((.((((((((((...((((((((((((.............))))))))))))...)))))))))).))))))))..

Structure

--        u          ACA            Aacau 
  gucaugug cUGCCUGUCU   CUUGCUGUGCAG     c
  |||||||| ||||||||||   ||||||||||||     c
  caguacac GACGGACAGA   GGACGACAUguc     g
aa        U          CAC            cacuc 

Annotation confidence High

Genome context

JH977644.1: 1285936-1286018 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-214

Mature efu-miR-214-5p

• Accession: MIMAT0058853
• Description: Eptesicus fuscus efu-miR-214-5p mature miRNA
• Sequence: 11 - UGCCUGUCUACACUUGCUGUGCAGA - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-214-3p

• Accession: MIMAT0035078
• Description: Eptesicus fuscus efu-miR-214-3p mature miRNA
• Sequence: 51 - UACAGCAGGCACAGACAGGCAGU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545