Stem-loop efu-mir-103b

Accession

MI0028775

Description

Eptesicus fuscus efu-mir-103b precursor miRNA

Sequence

149011 reads, 1694.0 reads per million, 8 experiments

cuuugugcuuucAGCUUCUUUACAGUGCUGCCUUGuagcauucaggucaAGCAGCAUUGUACAGGGCUAUGAAAgaaccaagaa
(((.((.(((((((((.((.(((((((((((.(((.(.(.....).))))))))))))))).)))))..)))))).)).)))..

Structure

--   u  g      --   U  U           C   u g a 
  cuu gu cuuucA  GCU CU UACAGUGCUGC UUG a c u
  ||| || ||||||  ||| || ||||||||||| ||| | | u
  gaa ca gAAAGU  CGG GA AUGUUACGACG Aac u g c
aa   c  a      AU   -  C           -   - g a 

Annotation confidence High

Genome context

JH977624.1: 4661201-4661284 [+]

Mature efu-miR-103b-5p

• Accession: MIMAT0058854
• Description: Eptesicus fuscus efu-miR-103b-5p mature miRNA
• Sequence: 13 - AGCUUCUUUACAGUGCUGCCUUG - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-103b-3p

• Accession: MIMAT0035083
• Description: Eptesicus fuscus efu-miR-103b-3p mature miRNA
• Sequence: 50 - AGCAGCAUUGUACAGGGCUAUGAAA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545