Stem-loop efu-mir-9335

Accession

MI0028776

Description

Eptesicus fuscus efu-mir-9335 precursor miRNA

Sequence

9335 reads, 242.0 reads per million, 8 experiments

ggaacuugccUGAGAUCACACACGAGUCCCCCUcucuccacccugggGGGACUCUUGUGUGACCUCCGgcaaguucuag
((((((((((.(((.(((((((.((((((((((...........)))))))))).))))))).))).))))))))))..

Structure

--          U   A       C          cucu 
  ggaacuugcc GAG UCACACA GAGUCCCCCU    c
  |||||||||| ||| ||||||| ||||||||||    c
  ucuugaacgG CUC AGUGUGU CUCAGGGggg    a
ga          C   C       U          uccc 

Annotation confidence High

Genome context

JH977726.1: 117283-117361 [-]

Mature efu-miR-9335-5p

• Accession: MIMAT0035084
• Description: Eptesicus fuscus efu-miR-9335-5p mature miRNA
• Sequence: 11 - UGAGAUCACACACGAGUCCCCCU - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9335-3p

• Accession: MIMAT0058855
• Description: Eptesicus fuscus efu-miR-9335-3p mature miRNA
• Sequence: 48 - GGGACUCUUGUGUGACCUCCG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545