Stem-loop efu-mir-455

Accession

MI0028777

Description

Eptesicus fuscus efu-mir-455 precursor miRNA

Sequence

45116 reads, 999.0 reads per million, 8 experiments

ccuggcgugagggUAUGUGCCUUUGGACUACAUCGUggaagccagcaccAUGCAGUCCAUGGGCAUAUACACUUgccucaaggc
(((((.(((((.((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).))))).)).))).

Structure

-   -  c     g          U      A   C   gaa 
 ccu gg gugag gUAUGUGCCU UGGACU CAU GUg   g
 ||| || ||||| |||||||||| |||||| ||| |||    
 gga cu cgUUC CAUAUACGGG ACCUGA GUA cac   c
c   a  c     A          U      C   c   gac 

Annotation confidence Medium

Genome context

JH977726.1: 91956-92039 [-]

Mature efu-miR-455-5p

• Accession: MIMAT0058856
• Description: Eptesicus fuscus efu-miR-455-5p mature miRNA
• Sequence: 14 - UAUGUGCCUUUGGACUACAUCGU - 36
• Evidence: experimental ; Illumina [1]

Mature efu-miR-455-3p

• Accession: MIMAT0035085
• Description: Eptesicus fuscus efu-miR-455-3p mature miRNA
• Sequence: 50 - AUGCAGUCCAUGGGCAUAUACACUU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545