Stem-loop efu-mir-652

Accession

MI0028780

Description

Eptesicus fuscus efu-mir-652 precursor miRNA

Sequence

1846 reads, 57.0 reads per million, 8 experiments

uaugcacugcaCAACCCUAGGAGAGUGUGCCAUUcacauagacuauaauUGAAUGGCGCCACUAGGGUUGUGCagugcacaac
..((((((((((((((((((......((((((((((..((.....))..))))))))))..))))))))))))))))))....

Structure

--ua                  GAGAGU          ca  g 
    ugcacugcaCAACCCUAG      GUGCCAUUca  ua a
    ||||||||||||||||||      ||||||||||  || c
    acgugaCGUGUUGGGAUC      CGCGGUAAGU  au u
caac                  ----AC          ua  a 

Annotation confidence High

Genome context

JH977835.1: 1247764-1247846 [-]

Mature efu-miR-652-5p

• Accession: MIMAT0058860
• Description: Eptesicus fuscus efu-miR-652-5p mature miRNA
• Sequence: 12 - CAACCCUAGGAGAGUGUGCCAUU - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-652-3p

• Accession: MIMAT0035088
• Description: Eptesicus fuscus efu-miR-652-3p mature miRNA
• Sequence: 50 - UGAAUGGCGCCACUAGGGUUGUGC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545