Stem-loop efu-mir-204

Accession

MI0028781

Description

Eptesicus fuscus efu-mir-204 precursor miRNA

Sequence

90650 reads, 1596.0 reads per million, 8 experiments

gacucguggacUUCCCUUUGUCAUCCUAUGCCUgagaauauaugaaggaGGCUGGGAAGGCAAAGGGACGUUcaauugucau
(((...(((((.((((((((((.(((((.((((...............))))))))).)))))))))).)))))...)))..

Structure

--   ucg     U          A     U    gagaau 
  gac   uggac UCCCUUUGUC UCCUA GCCU      a
  |||   ||||| |||||||||| ||||| ||||      u
  cug   acUUG AGGGAAACGG AGGGU CGGa      a
ua   uua     C          A     -    ggaagu 

Annotation confidence High

Genome context

JH977626.1: 25720817-25720898 [+]

Mature efu-miR-204-5p

• Accession: MIMAT0058861
• Description: Eptesicus fuscus efu-miR-204-5p mature miRNA
• Sequence: 12 - UUCCCUUUGUCAUCCUAUGCCU - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-204-3p

• Accession: MIMAT0035089
• Description: Eptesicus fuscus efu-miR-204-3p mature miRNA
• Sequence: 50 - GGCUGGGAAGGCAAAGGGACGUU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545