miRBase entry: efu-mir-141

Stem-loop efu-mir-141

Accession

MI0028790

Description

Eptesicus fuscus efu-mir-141 precursor miRNA

Sequence

gcucugggcccaucuuccaguacaguguuggauggucuaaucucgaagcuccUAACACUGUCUGGUAAAGAUGGCccccgggcug
((((.(((.(((((((((((.(((((((((((...((.......))...))).))))))))))))..))))))).))).))))..

Structure

--    u   c       --    u        -   ugg  ua 
  gcuc ggg ccaucuu  ccag acaguguu gga   uc  a
  |||| ||| |||||||  |||| |||||||| |||   ||  u
  cggg ccc GGUAGAA  GGUC UGUCACAA ccu   ag  c
gu    c   C       AU    -        U   cga  cu

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

JH977638.1: 17350306-17350390 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-141

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-141

Accession	MIMAT0035097
Description	Eptesicus fuscus efu-miR-141 mature miRNA
Sequence	53 - UAACACUGUCUGGUAAAGAUGGC - 75
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545