Stem-loop efu-mir-874

Accession

MI0028796

Description

Eptesicus fuscus efu-mir-874 precursor miRNA

Sequence

7143 reads, 95.0 reads per million, 8 experiments

uguuagcccugCGGCCCCACGCACCAGGGUAAGagagagucucauuucCUGCCCUGGCCCGAGGGACCGACUggcugggccu
..((((((...(((.(((.((..((((((((.((((........)))).))))))))..)).))).)))...))))))....

Structure

--ug      cug   C   A  CA        A    gag 
    uuagcc   CGG CCC CG  CCAGGGUA Gaga   u
    ||||||   ||| ||| ||  |||||||| ||||    
    ggucgg   GCC GGG GC  GGUCCCGU cuuu   c
uccg      UCA   A   A  CC        C    acu 

Annotation confidence High

Genome context

JH977612.1: 8426564-8426645 [+]

Mature efu-miR-874-5p

• Accession: MIMAT0058869
• Description: Eptesicus fuscus efu-miR-874-5p mature miRNA
• Sequence: 12 - CGGCCCCACGCACCAGGGUAAG - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-874-3p

• Accession: MIMAT0035102
• Description: Eptesicus fuscus efu-miR-874-3p mature miRNA
• Sequence: 49 - CUGCCCUGGCCCGAGGGACCGACU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545