Stem-loop efu-mir-9340

Accession

MI0028798

Description

Eptesicus fuscus efu-mir-9340 precursor miRNA

Sequence

ggaaaugacaUCCGGAAUGGAGUGGAGAGGUGAGCgucaguaguucaagguccuuccuccuugaaauucuaggauuuccuucuugg
((((.....(((((((((((((.((((.(((((((.......)))))...)))))))))).....))))).)))))))).......

Structure

-------    augac    -     -----    U    A  ---     gu 
       ggaa     aUCC GGAAU     GGAG GGAG GG   UGAGC  c
       ||||     |||| |||||     |||| |||| ||   |||||  a
       ccuu     uagg ucuua     ccuc cuuc cu   acuug  g
gguucuu    -----    a     aaguu    -    -  gga     au 

Annotation confidence Not enough data

Genome context

JH977628.1: 14069838-14069923 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9340

Mature efu-miR-9340

• Accession: MIMAT0035104
• Description: Eptesicus fuscus efu-miR-9340 mature miRNA
• Sequence: 11 - UCCGGAAUGGAGUGGAGAGGUGAGC - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545