Stem-loop efu-mir-129b

Accession

MI0028799

Description

Eptesicus fuscus efu-mir-129b precursor miRNA

Sequence

1036 reads, 15.0 reads per million, 8 experiments

uccuuuggauCUUUUUGCGGUCUGGGCUUGCUGuuccucucaaccguagucaggAAGCCCUUACCCCAAAAAGuaucuucgggag
((((..(((((((((((.(((..((((((.(((..(..(......)..).))).))))))..))).))))))).))))..)))).

Structure

-    uu    -       C   CU      G   uu cu uc 
 uccu  ggau CUUUUUG GGU  GGGCUU CUG  c  c  a
 ||||  |||| ||||||| |||  |||||| |||  |  |   
 aggg  ucua GAAAAAC CCA  CCCGAA gac  g  g  a
g    cu    u       C   UU      g   -u au cc 

Annotation confidence High

Genome context

JH977706.1: 1819384-1819468 [-]

Mature efu-miR-129b-5p

• Accession: MIMAT0035105
• Description: Eptesicus fuscus efu-miR-129b-5p mature miRNA
• Sequence: 11 - CUUUUUGCGGUCUGGGCUUGCUG - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-129b-3p

• Accession: MIMAT0058871
• Description: Eptesicus fuscus efu-miR-129b-3p mature miRNA
• Sequence: 55 - AAGCCCUUACCCCAAAAAG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545