Stem-loop efu-mir-449

Accession

MI0028804

Description

Eptesicus fuscus efu-mir-449 precursor miRNA

Sequence

69786 reads, 1415.0 reads per million, 8 experiments

ugugaugggcUGGCAGUGUAUUGUUAGCUGGUUGGuauguggaugacauCAGCUAACAUGCAACUGCUGUCccauugcaug
(((((((((.(((((((((((.((((((((((.(..((....))..))))))))))))))).))))))).)))))))))..

Structure

--         c       -    U          U Gu  g 
  ugugauggg UGGCAGU GUAU GUUAGCUGGU G  au u
  ||||||||| ||||||| |||| |||||||||| |  ||  
  acguuaccC GUCGUCA CGUA CAAUCGACua c  ua g
gu         U       A    -          - ag  g 

Annotation confidence High

Genome context

JH977884.1: 459967-460047 [-]

Mature efu-miR-449-5p

• Accession: MIMAT0035108
• Description: Eptesicus fuscus efu-miR-449-5p mature miRNA
• Sequence: 11 - UGGCAGUGUAUUGUUAGCUGGUUGG - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-449-3p

• Accession: MIMAT0058872
• Description: Eptesicus fuscus efu-miR-449-3p mature miRNA
• Sequence: 50 - CAGCUAACAUGCAACUGCUGUC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545