miRBase entry: efu-mir-450

Stem-loop efu-mir-450

Accession

MI0028829

Description

Eptesicus fuscus efu-mir-450 precursor miRNA

Sequence

gcuaaacuauUUUUGCGAUGUGUUCCUAAUAUguaauauaaauguauugggaacauuuugcauucauaguuuuguau
((.(((((((...(((((.(((((((((((((((.......))))))))))))))).)))))...))))))).))..

Structure

--  u       UUU     U               aa 
  gc aaacuau   UGCGA GUGUUCCUAAUAUgu  u
  || |||||||   ||||| |||||||||||||||  a
  ug uuugaua   acguu uacaaggguuaugua  u
ua  u       cuu     u               aa

Annotation confidence Not enough data

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Genome context

JH977765.1: 658793-658869 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from efu-mir-450

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-450

Accession	MIMAT0035128
Description	Eptesicus fuscus efu-miR-450 mature miRNA
Sequence	11 - UUUUGCGAUGUGUUCCUAAUAU - 32
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545