Stem-loop efu-mir-193a

Accession

MI0028845

Description

Eptesicus fuscus efu-mir-193a precursor miRNA

Sequence

16944 reads, 164.0 reads per million, 8 experiments

aguugagggcUGGGUCUUUGCGGGCGAGAUGAgggugucgguucAACUGGCCUACAAAGUCCCAGUccucggcucc
((((((((((((((.(((((.((((.((.((((........)))).)).)))).))))).))))))))))))))..

Structure

--              U     C    G  A    ggu 
  aguugagggcUGGG CUUUG GGGC AG UGAg   g
  |||||||||||||| ||||| |||| || ||||    
  ucggcuccUGACCC GAAAC UCCG UC Acuu   u
cc              U     A    G  A    ggc 

Annotation confidence High

Genome context

JH977654.1: 6909861-6909936 [-]

Mature efu-miR-193a-5p

• Accession: MIMAT0058890
• Description: Eptesicus fuscus efu-miR-193a-5p mature miRNA
• Sequence: 11 - UGGGUCUUUGCGGGCGAGAUGA - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-193a-3p

• Accession: MIMAT0035142
• Description: Eptesicus fuscus efu-miR-193a-3p mature miRNA
• Sequence: 45 - AACUGGCCUACAAAGUCCCAGU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545