Stem-loop efu-mir-21

Accession

MI0028851

Description

Eptesicus fuscus efu-mir-21 precursor miRNA

Sequence

6617886 reads, 64416.0 reads per million, 8 experiments

ccuugucgggUAGCUUAUCAGACUGAUGUUGACUguugaaucucauggCAACAGCAGUCGAUGGGCUGUCugacauuuug
...((((((((((((((((.(((((.(((((.((((.((...))))))))))).))))))))))))))))))))).....

Structure

--ccu                A     A     A    u  a 
     ugucgggUAGCUUAUC GACUG UGUUG CUgu ga  
     |||||||||||||||| ||||| ||||| |||| || u
     acaguCUGUCGGGUAG CUGAC ACAAC ggua cu  
guuuu                -     G     -    -  c 

Annotation confidence High

Genome context

JH977664.1: 7640732-7640811 [+]

Mature efu-miR-21-5p

• Accession: MIMAT0058893
• Description: Eptesicus fuscus efu-miR-21-5p mature miRNA
• Sequence: 11 - UAGCUUAUCAGACUGAUGUUGACU - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-21-3p

• Accession: MIMAT0035146
• Description: Eptesicus fuscus efu-miR-21-3p mature miRNA
• Sequence: 49 - CAACAGCAGUCGAUGGGCUGUC - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545