Stem-loop efu-mir-331

Accession

MI0028853

Description

Eptesicus fuscus efu-mir-331 precursor miRNA

Sequence

25512 reads, 280.0 reads per million, 8 experiments

uuggguuuguuCUAGGUAUGGUCCCAGGGAUCCcagaucaaaccagGCCCCUGGGCCUAUCCUAGAACcaaccuaaac
(((((((.((((((((.((((.(((((((...((...........)).))))))).)))))))))))).)))))))..

Structure

--       u        U    U       AUC  agau 
  uuggguu guuCUAGG AUGG CCCAGGG   Cc    c
  ||||||| |||||||| |||| |||||||   ||    a
  aauccaa CAAGAUCC UAUC GGGUCCC   Gg    a
ca       c        -    C       --C  acca 

Annotation confidence High

Genome context

JH977638.1: 15533534-15533611 [-]

Mature efu-miR-331-5p

• Accession: MIMAT0058895
• Description: Eptesicus fuscus efu-miR-331-5p mature miRNA
• Sequence: 12 - CUAGGUAUGGUCCCAGGGAUCC - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-331-3p

• Accession: MIMAT0035148
• Description: Eptesicus fuscus efu-miR-331-3p mature miRNA
• Sequence: 47 - GCCCCUGGGCCUAUCCUAGAAC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545