Stem-loop efu-mir-139

Accession

MI0028870

Description

Eptesicus fuscus efu-mir-139 precursor miRNA

Sequence

454 reads, 7.0 reads per million, 8 experiments

ucagguguauUCUACAGUGCACGUGUCUCCAGUguggcucggaggcUGGAGACGCGGCCCUGUUGGAGUaacaacugaa
((((.((((((((((((.((.((((((((((((.(.......).)))))))))))))).))).)))))).))).)))).

Structure

-    g   -      -   U  A            g gg 
 ucag ugu auUCUA CAG GC CGUGUCUCCAGU u  c
 |||| ||| |||||| ||| || |||||||||||| |  u
 aguc aca UGAGGU GUC CG GCGCAGAGGUcg a  c
a    a   a      U   C  -            g gg 

Annotation confidence High

Genome context

JH977667.1: 1134562-1134640 [-]

Mature efu-miR-139-5p

• Accession: MIMAT0058908
• Description: Eptesicus fuscus efu-miR-139-5p mature miRNA
• Sequence: 11 - UCUACAGUGCACGUGUCUCCAGU - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-139-3p

• Accession: MIMAT0035163
• Description: Eptesicus fuscus efu-miR-139-3p mature miRNA
• Sequence: 47 - UGGAGACGCGGCCCUGUUGGAGU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545