miRBase entry: efu-mir-99b

Stem-loop efu-mir-99b

Accession

MI0028897

Description

Eptesicus fuscus efu-mir-99b precursor miRNA

Sequence

uccuggcaccCACCCGUAGAACCGACCUUGCGGGGccuucgccgcacacaagcucgugucuguggguccgugucgggggc
(((((((((..(((((((((..(((.((((.(.(((....))).)...)))).)))..)))))))))..)))))))))..

Structure

--         cC         AC   C    --C G   c 
  uccuggcac  ACCCGUAGA  CGA CUUG   G GGc u
  |||||||||  |||||||||  ||| ||||   | |||  
  ggggcugug  ugggugucu  gcu gaac   c ccg u
cg         cc         gu   c    aca g   c

Annotation confidence Not enough data

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Genome context

JH977711.1: 794487-794566 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-99b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-99b

Accession	MIMAT0035185
Description	Eptesicus fuscus efu-miR-99b mature miRNA
Sequence	11 - CACCCGUAGAACCGACCUUGCGGGG - 35
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545