Stem-loop efu-mir-99b

Accession

MI0028897

Description

Eptesicus fuscus efu-mir-99b precursor miRNA

Sequence

2426985 reads, 23036.0 reads per million, 8 experiments

uccuggcaccCACCCGUAGAACCGACCUUGCGGGGccuucgccgcacaCAAGCUCGUGUCUGUGGGUCCGugucgggggc
(((((((((..(((((((((..(((.((((.(.(((....))).)...)))).)))..)))))))))..)))))))))..

Structure

--         cC         AC   C    --C G   c 
  uccuggcac  ACCCGUAGA  CGA CUUG   G GGc u
  |||||||||  |||||||||  ||| ||||   | |||  
  ggggcuguG  UGGGUGUCU  GCU GAAC   c ccg u
cg         CC         GU   C    aca g   c 

Annotation confidence High

Genome context

JH977711.1: 794487-794566 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-99b

Mature efu-miR-99b-5p

• Accession: MIMAT0035185
• Description: Eptesicus fuscus efu-miR-99b-5p mature miRNA
• Sequence: 11 - CACCCGUAGAACCGACCUUGCGGGG - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-99b-3p

• Accession: MIMAT0058920
• Description: Eptesicus fuscus efu-miR-99b-3p mature miRNA
• Sequence: 49 - CAAGCUCGUGUCUGUGGGUCCG - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545