Stem-loop efu-mir-320

Accession

MI0028904

Description

Eptesicus fuscus efu-mir-320 precursor miRNA

Sequence

55761 reads, 664.0 reads per million, 8 experiments

cccgcucgccuccGCCUUCUCUUCCCGGUUCUUCCcggagucgggAAAAGCUGGGUUGAGAGGGCGAaaaaggaagaggg
.((.(((.(((.(((((((((..(((((((.((((((....)))))).)))))))..)))))))))....)))..)))))

Structure

c  g   -g   ---c         UU       C      g 
 cc cuc  ccu    cGCCUUCUC  CCCGGUU UUCCcg a
 || |||  |||    |||||||||  ||||||| ||||||  
 gg gag  gga    GCGGGAGAG  GGGUCGA AAgggc g
-  -   aa   aaaA         UU       A      u 

Annotation confidence Medium

Genome context

JH977678.1: 7461979-7462058 [+]

Mature efu-miR-320-5p

• Accession: MIMAT0058924
• Description: Eptesicus fuscus efu-miR-320-5p mature miRNA
• Sequence: 46 - AAAAGCUGGGUUGAGAGGGCGA - 67
• Evidence: experimental ; Illumina [1]

Mature efu-miR-320-3p

• Accession: MIMAT0035190
• Description: Eptesicus fuscus efu-miR-320-3p mature miRNA
• Sequence: 14 - GCCUUCUCUUCCCGGUUCUUCC - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545