Stem-loop efu-mir-30b

Accession

MI0028906

Description

Eptesicus fuscus efu-mir-30b precursor miRNA

Sequence

612480 reads, 6528.0 reads per million, 8 experiments

cgacagauacUGUAAACAUCCUACACUCUCAGCUGuggaaaguagaaaagCUGGGAGAAGGCUGUUUACUCUcucugccuug
...((((....(((((((.(((...(((((((((..............))))))))).))).)))))))....)))).....

Structure

--cga    uacU       U   ACA         Guggaa 
     caga    GUAAACA CCU   CUCUCAGCU      a
     ||||    ||||||| |||   |||||||||       
     gucu    CAUUUGU GGA   GAGGGUCga      g
guucc    cUCU       C   --A         aaagau 

Annotation confidence High

Genome context

JH977611.1: 11936230-11936311 [-]

Mature efu-miR-30b-5p

• Accession: MIMAT0035192
• Description: Eptesicus fuscus efu-miR-30b-5p mature miRNA
• Sequence: 11 - UGUAAACAUCCUACACUCUCAGCUG - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-30b-3p

• Accession: MIMAT0058925
• Description: Eptesicus fuscus efu-miR-30b-3p mature miRNA
• Sequence: 51 - CUGGGAGAAGGCUGUUUACUCU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545