Stem-loop efu-mir-140

Accession

MI0028907

Description

Eptesicus fuscus efu-mir-140 precursor miRNA

Sequence

70975 reads, 1355.0 reads per million, 8 experiments

uguguccugcCAGUGGUUUUACCCUAUGGUAGguuacgucaugcuguucuACCACAGGGUAGAACCACGGAcaggauaccg
.((((((((((.(((((((((((((.(((((((.((.((...)))).))))))).))))))))))))))).))))))))..

Structure

-u        -  A             A       u  c  c 
  guguccug cC GUGGUUUUACCCU UGGUAGg ua gu  
  |||||||| || ||||||||||||| ||||||| || || a
  cauaggac GG CACCAAGAUGGGA ACCAucu gu cg  
gc        A  -             C       u  -  u 

Annotation confidence High

Genome context

JH977621.1: 26675376-26675456 [+]

Mature efu-miR-140-5p

• Accession: MIMAT0035193
• Description: Eptesicus fuscus efu-miR-140-5p mature miRNA
• Sequence: 11 - CAGUGGUUUUACCCUAUGGUAG - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-140-3p

• Accession: MIMAT0058926
• Description: Eptesicus fuscus efu-miR-140-3p mature miRNA
• Sequence: 51 - ACCACAGGGUAGAACCACGGA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545