Stem-loop gsa-mir-71b

Accession

MI0028944

Description

Gyrodactylus salaris gsa-mir-71b precursor miRNA

Sequence

UGAAAGACUUGCGUAGUGAGACGCUcuaaaugugcauagCGUCUUCUAUCAAGACUUUCGUA
.(((((.((((.((((.((((((((............)))))))))))))))).)))))...

Structure

--U     A    C    U        cuaaa 
   GAAAG CUUG GUAG GAGACGCU     u
   ||||| |||| |||| ||||||||      
   CUUUC GAAC UAUC UUCUGCga     g
AUG     A    -    -        uacgu 

Annotation confidence Low

Genome context

Unknown

Mature gsa-miR-71b-5p

• Accession: MIMAT0035250
• Description: Gyrodactylus salaris gsa-miR-71b-5p mature miRNA
• Sequence: 1 - UGAAAGACUUGCGUAGUGAGACGCU - 25
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-71b-3p

• Accession: MIMAT0035251
• Description: Gyrodactylus salaris gsa-miR-71b-3p mature miRNA
• Sequence: 40 - CGUCUUCUAUCAAGACUUUCGUA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628