Stem-loop gsa-let-7

Accession

MI0028949

Description

Gyrodactylus salaris gsa-let-7 precursor miRNA

Sequence

AGAGGUAGAGUGUUGUAGAGAUuauuacaugugggggaauauuauccuuuuugcagaauCUCUACAUCAAUCUGCCUUAC
.((((((((.((.((((((((((....((...((((........))))...))...)))))))))).)).))))))))..

Structure

-A        G  U          auua  ugu    gaa 
  GAGGUAGA UG UGUAGAGAUu    ca   gggg   u
  |||||||| || ||||||||||    ||   ||||    
  UUCCGUCU AC ACAUCUCuaa    gu   uccu   a
CA        A  U          -gac  uuu    auu 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-let-7-5p

• Accession: MIMAT0035260
• Description: Gyrodactylus salaris gsa-let-7-5p mature miRNA
• Sequence: 1 - AGAGGUAGAGUGUUGUAGAGAU - 22
• Evidence: experimental ; Illumina [1]

Mature gsa-let-7-3p

• Accession: MIMAT0035261
• Description: Gyrodactylus salaris gsa-let-7-3p mature miRNA
• Sequence: 60 - CUCUACAUCAAUCUGCCUUAC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628