Stem-loop gsa-mir-219

Accession

MI0028951

Description

Gyrodactylus salaris gsa-mir-219 precursor miRNA

Sequence

UGAUUGUCCACUCGCAUUUCUUGucgccuguugacuucucucaauuacaAGAUGUGUGAAUGGACAUCUUA
.(((.(((((.((((((.((((((.....(((((......))))).)))))).)))))).))))))))...

Structure

--U   U     C      U      cgccu     cu 
   GAU GUCCA UCGCAU UCUUGu     guuga  u
   ||| ||||| |||||| ||||||     |||||   
   CUA CAGGU AGUGUG AGAaca     uaacu  c
AUU   -     A      U      ----u     cu 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-219-5p

• Accession: MIMAT0035264
• Description: Gyrodactylus salaris gsa-miR-219-5p mature miRNA
• Sequence: 1 - UGAUUGUCCACUCGCAUUUCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-219-3p

• Accession: MIMAT0035265
• Description: Gyrodactylus salaris gsa-miR-219-3p mature miRNA
• Sequence: 50 - AGAUGUGUGAAUGGACAUCUUA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628