miRBase entry: gsa-mir-1992

Stem-loop gsa-mir-1992


Accession
MI0028975
Description
Gyrodactylus salaris gsa-mir-1992 precursor miRNA


Sequence

GUGGCUAUGUUCAAUUGCUUUGAUaccuuaaguugcguuuaUCAGCAGUUGAGUCAUUGUCAUG
(((((.(((((((((((((..((((..............)))))))))))))).))).))))).

Structure
-     U   -          UU    ccuuaa 
 GUGGC AUG UUCAAUUGCU  GAUa      g
 ||||| ||| ||||||||||  ||||       
 UACUG UAC GAGUUGACGA  CUau      u
G     U   U          --    uugcgu 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature gsa-miR-1992-5p

Accession MIMAT0035312
Description Gyrodactylus salaris gsa-miR-1992-5p mature miRNA
Sequence 1 - GUGGCUAUGUUCAAUUGCUUUGAU - 24
Evidence experimental
Illumina [1]

Mature gsa-miR-1992-3p

Accession MIMAT0035313
Description Gyrodactylus salaris gsa-miR-1992-3p mature miRNA
Sequence 42 - UCAGCAGUUGAGUCAUUGUCAUG - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24025793
    Substantial loss of conserved and gain of novel MicroRNA families in flatworms
    "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
    "Mol Biol Evol (2013) 30:2619-2628