Stem-loop gsa-mir-71c

Accession

MI0028979

Description

Gyrodactylus salaris gsa-mir-71c precursor miRNA

Sequence

GAAGGACAGGAAUAAUGAGAAcuuagaugaUACUCAUUACCCAUGUCUUUCA
((((((((((..(((((((.............))))))).)).)))))))).

Structure

-        -  AA       AAcuu 
 GAAGGACA GG  UAAUGAG     a
 |||||||| ||  |||||||     g
 CUUUCUGU CC  AUUACUC     a
A        A  -C       AUagu 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-71c-5p

• Accession: MIMAT0035320
• Description: Gyrodactylus salaris gsa-miR-71c-5p mature miRNA
• Sequence: 1 - GAAGGACAGGAAUAAUGAGAA - 21
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-71c-3p

• Accession: MIMAT0035321
• Description: Gyrodactylus salaris gsa-miR-71c-3p mature miRNA
• Sequence: 31 - UACUCAUUACCCAUGUCUUUCA - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628