Stem-loop xtr-mir-460a

Accession

MI0029368

Description

Xenopus tropicalis xtr-mir-460a precursor miRNA

Sequence

uggcuuuauagagccugcauuguacacacugugugugcaccucagacuugCACAGCGCAUACAAUGUGGAUGCuauaugaguc
.((((((((((...((((((((((.....((((((((((.........)))))).))))))))))))))...))))).)))))

Structure

u     -     agc          cacac    -      ccu 
 ggcuu uauag   cugcauugua     ugug ugugca   c
 ||||| |||||   ||||||||||     |||| ||||||   a
 cugag auauC   GGUGUAACAU     ACGC ACACgu   g
-     u     GUA          -----    G      uca 

Annotation confidence Not enough data

Genome context

chr6: 3768586-3768668 [-]

Mature xtr-miR-460a-3p

• Accession: MIMAT0037591
• Description: Xenopus tropicalis xtr-miR-460a-3p mature miRNA
• Sequence: 51 - CACAGCGCAUACAAUGUGGAUGC - 73
• Evidence: not_experimental

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196