Stem-loop xtr-mir-460b

Accession

MI0029369

Description

Xenopus tropicalis xtr-mir-460b precursor miRNA

Sequence

ugacucuacauuguccucauuguacaugcuguguguaucuauuucucuuaCACAGCGCAUGCAAUGUGGAUAuauuggauguc
.(((((((...(((((.(((((((..(((((((((.............)))))))))..))))))).)))))...)))).)))

Structure

u   -    cau     u       ca         uaucu 
 gac ucua   ugucc cauugua  ugcugugug     a
 ||| ||||   ||||| |||||||  |||||||||     u
 cug aggu   AUAGG GUAACGU  GCGACACau     u
-   u    uau     U       AC         ucucu 

Annotation confidence Not enough data

Genome context

chr8: 44862150-44862232 [+]

Mature xtr-miR-460b-3p

• Accession: MIMAT0037592
• Description: Xenopus tropicalis xtr-miR-460b-3p mature miRNA
• Sequence: 51 - CACAGCGCAUGCAAUGUGGAUA - 72
• Evidence: not_experimental

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196