Stem-loop dsi-mir-4966-3

Accession

MI0030859

Description

Drosophila simulans dsi-mir-4966-3 precursor miRNA

Sequence

cggcacuggagUACUAAAUAUAUUGCACAUGUUcauacauuuucauacaUGUAAAACAUAUUUAGAACUCAagu
....(((.((((.((((((((.((..((((((..............))))))..)).)))))))).)))).)))

Structure

cggc   g    A        A  GC      Ucauac 
    acu gagU CUAAAUAU UU  ACAUGU      a
    ||| |||| |||||||| ||  ||||||       
    uga CUCA GAUUUAUA AA  UGUaca      u
----   A    A        C  AA      uacuuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature dsi-miR-4966-5p

• Accession: MIMAT0039115
• Description: Drosophila simulans dsi-miR-4966-5p mature miRNA
• Sequence: 12 - UACUAAAUAUAUUGCACAUGUU - 33
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-4966-3-3p

• Accession: MIMAT0039117
• Description: Drosophila simulans dsi-miR-4966-3-3p mature miRNA
• Sequence: 50 - UGUAAAACAUAUUUAGAACUCA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250