miRBase entry: dsi-mir-974

Stem-loop dsi-mir-974

Accession

MI0030861

Description

Drosophila simulans dsi-mir-974 precursor miRNA

Sequence

AAGCGAGCAAAGAAGUGGUAUUugcguuuccaagaacaaaUAUAACUUCUUUGAAAGCUAGGu
.(((...(((((((((.(((((((............))))))).)))))))))...)))....

Structure

---A   GAG         G       cguuu 
    AGC   CAAAGAAGU GUAUUug     c
    |||   ||||||||| |||||||      
    UCG   GUUUCUUCA UAUaaac     c
uGGA   AAA         A       aagaa

Annotation confidence Not enough data

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Genome context

chrX: 15011455-15011517 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dsi-mir-974

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dsi-miR-974-5p

Accession	MIMAT0039120
Description	Drosophila simulans dsi-miR-974-5p mature miRNA
Sequence	1 - AAGCGAGCAAAGAAGUGGUAUU - 22
Evidence	experimental Illumina [1]

Mature dsi-miR-974-3p

Accession	MIMAT0039121
Description	Drosophila simulans dsi-miR-974-3p mature miRNA
Sequence	41 - UAUAACUUCUUUGAAAGCUAGG - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250