Stem-loop dsi-mir-2499

Accession

MI0030862

Description

Drosophila simulans dsi-mir-2499 precursor miRNA

Sequence

AGGCGUGGACGUCAGCACAAUGCCuuuguuuggcggcAUGUGGAUGACGUUCAUGUCCA
.(((((((((((((.((((.((((..........))))))))..)))))))))))))..

Structure

-A             -G    A    uuug 
  GGCGUGGACGUCA  CACA UGCC    u
  |||||||||||||  |||| ||||     
  CUGUACUUGCAGU  GUGU Acgg    u
AC             AG    -    cggu 

Annotation confidence Low

Genome context

chrX: 15016882-15016940 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dsi-mir-2499

Mature dsi-miR-2499-5p

• Accession: MIMAT0039122
• Description: Drosophila simulans dsi-miR-2499-5p mature miRNA
• Sequence: 1 - AGGCGUGGACGUCAGCACAAUGCC - 24
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-2499-3p

• Accession: MIMAT0039123
• Description: Drosophila simulans dsi-miR-2499-3p mature miRNA
• Sequence: 38 - AUGUGGAUGACGUUCAUGUCCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250