miRBase entry: dse-mir-991

Stem-loop dse-mir-991

Accession

MI0030867

Description

Drosophila sechellia dse-mir-991 precursor miRNA

Sequence

UUUCCCAACUACAUCUAUUAAUacuuauuuuaacgucguaUUAAAGUUGAAGUUUGGAAAAu
(((((.((((.((.((.(((((((.............))))))))).)).)))).)))))..

Structure

--     C    A  U  A       uuauu 
  UUUCC AACU CA CU UUAAUac     u
  ||||| |||| || || |||||||     u
  AAAGG UUGA GU GA AAUUaug     a
uA     U    A  U  -       cugca

Annotation confidence Not enough data

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Genome context

scaffold_1: 14027438-14027499 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dse-mir-991

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-991-5p

Accession	MIMAT0039128
Description	Drosophila sechellia dse-miR-991-5p mature miRNA
Sequence	1 - UUUCCCAACUACAUCUAUUAAU - 22
Evidence	experimental Illumina [1]

Mature dse-miR-991-3p

Accession	MIMAT0039129
Description	Drosophila sechellia dse-miR-991-3p mature miRNA
Sequence	41 - UUAAAGUUGAAGUUUGGAAAA - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250