miRBase entry: dse-mir-992

Stem-loop dse-mir-992

Accession

MI0030868

Description

Drosophila sechellia dse-mir-992 precursor miRNA

Sequence

CUGGUAUCAGAUAGGUGUAAUUUuuguguuuguauAGUACACGUUUCUGGAACCAAGcc
.((((.(((((.(.(((((....(((((....)))))))))).).))))).))))....

Structure

---C    A     U G     AUUU     u 
    UGGU UCAGA A GUGUA    uugug u
    |||| ||||| | |||||    |||||  
    ACCA GGUCU U CACAU    GAuau u
ccGA    A     U G     ----     g

Annotation confidence Not enough data

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Genome context

scaffold_1: 14027554-14027612 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dse-mir-992

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-992-5p

Accession	MIMAT0039130
Description	Drosophila sechellia dse-miR-992-5p mature miRNA
Sequence	1 - CUGGUAUCAGAUAGGUGUAAUUU - 23
Evidence	experimental Illumina [1]

Mature dse-miR-992-3p

Accession	MIMAT0039131
Description	Drosophila sechellia dse-miR-992-3p mature miRNA
Sequence	36 - AGUACACGUUUCUGGAACCAAG - 57
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250