Stem-loop dse-mir-303

Accession

MI0030872

Description

Drosophila sechellia dse-mir-303 precursor miRNA

Sequence

ucuugcuUUGGCUUUAAAGGAAUCUAGUUugauuacgaaaacUAGUUUCCUCUAAGGUUUUAAAcauuaca
.........(((((((.(((((.(((((((........))))))).))))).)))))))............

Structure

---ucuugcuUU       A     U       gau 
            GGCUUUA AGGAA CUAGUUu   u
            ||||||| ||||| |||||||    
            UUGGAAU UCCUU GAUcaaa   a
acauuacAAAUU       C     U       agc 

Annotation confidence Low

Genome context

scaffold_4: 2464338-2464408 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dse-mir-303

Mature dse-miR-303-5p

• Accession: MIMAT0039134
• Description: Drosophila sechellia dse-miR-303-5p mature miRNA
• Sequence: 8 - UUGGCUUUAAAGGAAUCUAGUU - 29
• Evidence: experimental ; Illumina [1]

Mature dse-miR-303-3p

• Accession: MIMAT0039135
• Description: Drosophila sechellia dse-miR-303-3p mature miRNA
• Sequence: 43 - UAGUUUCCUCUAAGGUUUUAAA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250