Stem-loop dse-mir-2582-1

Accession

MI0030875

Description

Drosophila sechellia dse-mir-2582-1 precursor miRNA

Sequence

UGGACAGUGUUCCUAAUAGUCUGUuauuauuacacAAACCUUGGGAAUACUUUCGAGa
(.((.(((((((((((..((.(((((....)).))).)).))))))))))).)).)..

Structure

-- G  C           UA  C   -  u 
  U GA AGUGUUCCUAA  GU UGU ua u
  | || |||||||||||  || ||| ||  
  A CU UCAUAAGGGUU  CA Aca au a
aG G  U           -C  A   c  u 

Annotation confidence Low

Genome context

scaffold_4: 2465160-2465217 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dse-mir-2582-1

Mature dse-miR-2582-5p

• Accession: MIMAT0039137
• Description: Drosophila sechellia dse-miR-2582-5p mature miRNA
• Sequence: 1 - UGGACAGUGUUCCUAAUAGUCUGU - 24
• Evidence: experimental ; Illumina [1]

Mature dse-miR-2582-3p

• Accession: MIMAT0039138
• Description: Drosophila sechellia dse-miR-2582-3p mature miRNA
• Sequence: 36 - AAACCUUGGGAAUACUUUCGAG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250