Stem-loop dse-mir-983

Accession

MI0030877

Description

Drosophila sechellia dse-mir-983 precursor miRNA

Sequence

AGUAAUACCUUUCGAACAUAUGauuuucagucauucaUGAGUUCGUUAGGUAUUAUCUa
.(((((((((..(((((.(((((...........))))).)))))..)))))))))...

Structure

--A         UU     A     uuuu 
   GUAAUACCU  CGAAC UAUGa    c
   |||||||||  ||||| |||||    a
   UAUUAUGGA  GCUUG GUacu    g
aUC         UU     A     uacu 

Annotation confidence Low

Genome context

scaffold_4: 2462240-2462298 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dse-mir-983

Mature dse-miR-983-5p

• Accession: MIMAT0039139
• Description: Drosophila sechellia dse-miR-983-5p mature miRNA
• Sequence: 1 - AGUAAUACCUUUCGAACAUAUG - 22
• Evidence: experimental ; Illumina [1]

Mature dse-miR-983-3p

• Accession: MIMAT0039140
• Description: Drosophila sechellia dse-miR-983-3p mature miRNA
• Sequence: 38 - UGAGUUCGUUAGGUAUUAUCU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250