miRBase entry: dse-mir-983

Stem-loop dse-mir-983

Accession

MI0030877

Description

Drosophila sechellia dse-mir-983 precursor miRNA

Sequence

AGUAAUACCUUUCGAACAUAUGauuuucagucauucaUGAGUUCGUUAGGUAUUAUCUa
.(((((((((..(((((.(((((...........))))).)))))..)))))))))...

Structure

--A         UU     A     uuuu 
   GUAAUACCU  CGAAC UAUGa    c
   |||||||||  ||||| |||||    a
   UAUUAUGGA  GCUUG GUacu    g
aUC         UU     A     uacu

Annotation confidence Not enough data

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Genome context

scaffold_4: 2462240-2462298 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dse-mir-983

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-983-5p

Accession	MIMAT0039139
Description	Drosophila sechellia dse-miR-983-5p mature miRNA
Sequence	1 - AGUAAUACCUUUCGAACAUAUG - 22
Evidence	experimental Illumina [1]

Mature dse-miR-983-3p

Accession	MIMAT0039140
Description	Drosophila sechellia dse-miR-983-3p mature miRNA
Sequence	38 - UGAGUUCGUUAGGUAUUAUCU - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250