Stem-loop dse-mir-978b

Accession

MI0030889

Description

Drosophila sechellia dse-mir-978b precursor miRNA

Sequence

caauuuacgggacuggacacgauucucgacuacaacgUAAGCCAGUGGCGUAGAUUGCag
(((((((((..(((((..(((..............)))...)))))..)))))))))...

Structure

---         gg     -ac   auucuc 
   caauuuacg  acugg   acg      g
   |||||||||  |||||   |||       
   GUUAGAUGC  UGACC   Ugc      a
gaC         GG     GAA   aacauc 

Annotation confidence Low

Genome context

scaffold_8: 1737879-1737938 [-]

Clustered miRNAs

9 other miRNAs are < 10 kb from dse-mir-978b

Mature dse-miR-978b

• Accession: MIMAT0039155
• Description: Drosophila sechellia dse-miR-978b mature miRNA
• Sequence: 38 - UAAGCCAGUGGCGUAGAUUGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250