miRBase entry: dse-mir-977

Stem-loop dse-mir-977

Accession

MI0030890

Description

Drosophila sechellia dse-mir-977 precursor miRNA

Sequence

UAGAUAACUCGAAUAUCACAUCuucaguguucgauaucuggUGAGAUAUUCACGUUGUCUAAAc
((((((((..(((((((.((((.................)))).)))))))..))))))))...

Structure

---        UC       A    uucagug 
   UAGAUAAC  GAAUAUC CAUC       u
   ||||||||  ||||||| ||||       u
   AUCUGUUG  CUUAUAG GUgg       c
cAA        CA       A    ucuauag

Annotation confidence Not enough data

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Genome context

scaffold_8: 1735396-1735459 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from dse-mir-977

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dse-miR-977-5p

Accession	MIMAT0039156
Description	Drosophila sechellia dse-miR-977-5p mature miRNA
Sequence	1 - UAGAUAACUCGAAUAUCACAUC - 22
Evidence	experimental Illumina [1]

Mature dse-miR-977-3p

Accession	MIMAT0039157
Description	Drosophila sechellia dse-miR-977-3p mature miRNA
Sequence	42 - UGAGAUAUUCACGUUGUCUAAA - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250