Stem-loop dse-mir-977

Accession

MI0030890

Description

Drosophila sechellia dse-mir-977 precursor miRNA

Sequence

802 reads, 252.0 reads per million, 1 experiments

UAGAUAACUCGAAUAUCACAUCUucaguguucgauaucuggUGAGAUAUUCACGUUGUCUAAac
((((((((..(((((((.((((.................)))).)))))))..))))))))...

Structure

---        UC       A    Uucagug 
   UAGAUAAC  GAAUAUC CAUC       u
   ||||||||  ||||||| ||||       u
   AUCUGUUG  CUUAUAG GUgg       c
caA        CA       A    ucuauag 

Annotation confidence High

Genome context

scaffold_8: 1735396-1735459 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from dse-mir-977

Mature dse-miR-977-5p

• Accession: MIMAT0039156
• Description: Drosophila sechellia dse-miR-977-5p mature miRNA
• Sequence: 1 - UAGAUAACUCGAAUAUCACAUCU - 23
• Evidence: experimental ; Illumina [1]

Mature dse-miR-977-3p

• Accession: MIMAT0039157
• Description: Drosophila sechellia dse-miR-977-3p mature miRNA
• Sequence: 42 - UGAGAUAUUCACGUUGUCUAA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250