Stem-loop dse-mir-9369

Accession

MI0030892

Description

Drosophila sechellia dse-mir-9369 precursor miRNA

Sequence

AGCGAGAGGGUAUUAUGUAUUCauauuuauaaaaucaggAUACAUAUUCUUCUUUGGCUUUa
(((.((((((...(((((((((..((((...))))..)))))))))...)))))).)))...

Structure

---   G      UAU         au    a 
   AGC AGAGGG   UAUGUAUUC  auuu  
   ||| ||||||   |||||||||  |||| u
   UCG UUUCUU   AUACAUAgg  uaaa  
aUU   G      CUU         ac    a 

Annotation confidence Low

Genome context

scaffold_8: 1727807-1727868 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from dse-mir-9369

Mature dse-miR-9369-5p

• Accession: MIMAT0039160
• Description: Drosophila sechellia dse-miR-9369-5p mature miRNA
• Sequence: 1 - AGCGAGAGGGUAUUAUGUAUUC - 22
• Evidence: experimental ; Illumina [1]

Mature dse-miR-9369-3p

• Accession: MIMAT0039161
• Description: Drosophila sechellia dse-miR-9369-3p mature miRNA
• Sequence: 40 - AUACAUAUUCUUCUUUGGCUUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250