Stem-loop dya-mir-2498

Accession

MI0030895

Description

Drosophila yakuba dya-mir-2498 precursor miRNA

Sequence

aauauUUAAGUCUGUUCUGCUUAGAUUugugaauuugacaaAAUCUGCACAGCCGGCUUAAUguauuuu
((((((((((((.(((.(((..((((((((.......)).))))))))).))).))))))).)))))..

Structure

--     -       U   C   UU      -  ga 
  aauau UUAAGUC GUU UGC  AGAUUu gu  a
  ||||| ||||||| ||| |||  |||||| ||  u
  uuaug AAUUCGG CGA ACG  UCUAAa ca  u
uu     U       C   C   --      a  gu 

Annotation confidence Not enough data

Genome context

chr2R: 12723909-12723977 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dya-mir-2498

Mature dya-miR-2498-5p

• Accession: MIMAT0039166
• Description: Drosophila yakuba dya-miR-2498-5p mature miRNA
• Sequence: 6 - UUAAGUCUGUUCUGCUUAGAUU - 27
• Evidence: experimental ; Illumina [1]

Mature dya-miR-2498-3p

• Accession: MIMAT0039167
• Description: Drosophila yakuba dya-miR-2498-3p mature miRNA
• Sequence: 42 - AAUCUGCACAGCCGGCUUAAU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250