miRBase entry: dya-mir-975

Stem-loop dya-mir-975

Accession

MI0030906

Description

Drosophila yakuba dya-mir-975 precursor miRNA

Sequence

uugaauucuugacuuUAAACACUGCCUACAUACUGUAUguguuuugcacccgauACAGAUGUGGGGGUCGUUUGcaaucagagauuccgca
..(((((.((((...((((((((.(((((((.((((((((((...))))...)))))))))))))))).)))))...)))).)))))....

Structure

--uu     c    cuu     -   G       A      ---    u 
    gaauu uuga   UAAAC ACU CCUACAU CUGUAU   gugu  
    ||||| ||||   ||||| ||| ||||||| ||||||   |||| u
    cuuag gacu   GUUUG UGG GGGUGUA GACAua   cacg  
acgc     a    aac     C   -       -      gcc    u

Annotation confidence Not enough data

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Genome context

chrX: 11885970-11886060 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from dya-mir-975

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dya-miR-975-5p

Accession	MIMAT0039177
Description	Drosophila yakuba dya-miR-975-5p mature miRNA
Sequence	16 - UAAACACUGCCUACAUACUGUAU - 38
Evidence	experimental Illumina [1]

Mature dya-miR-975-3p

Accession	MIMAT0039178
Description	Drosophila yakuba dya-miR-975-3p mature miRNA
Sequence	55 - ACAGAUGUGGGGGUCGUUUG - 74
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250