Stem-loop der-mir-9681

Accession

MI0030912

Description

Drosophila erecta der-mir-9681 precursor miRNA

Sequence

149219 reads, 1890.0 reads per million, 19 experiments

UUUCCGACAAUGCGAUCUAGGCguuucuaucgcUGAGGUAGUAUUGUUUGAAAGAU
((((.((((((((.((((.((((.......)))).)))).)))))))).))))...

Structure

---    C        G    A    uu 
   UUUC GACAAUGC AUCU GGCg  u
   |||| |||||||| |||| ||||  c
   AAAG UUGUUAUG UGGA Ucgc  u
UAG    U        A    G    ua 

Annotation confidence High

Genome context

scaffold_4845: 10618728-10618783 [-]

Clustered miRNAs

14 other miRNAs are < 10 kb from der-mir-9681

Mature der-miR-9681-5p

• Accession: MIMAT0039188
• Description: Drosophila erecta der-miR-9681-5p mature miRNA
• Sequence: 1 - UUUCCGACAAUGCGAUCUAGGC - 22
• Evidence: experimental ; Illumina [1]

Mature der-miR-9681-3p

• Accession: MIMAT0039189
• Description: Drosophila erecta der-miR-9681-3p mature miRNA
• Sequence: 34 - UGAGGUAGUAUUGUUUGAAAGAU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250