Stem-loop der-mir-992-1

Accession

MI0030915

Description

Drosophila erecta der-mir-992-1 precursor miRNA

Sequence

12043 reads, 88.0 reads per million, 19 experiments

UAGUAUCAGCAAGGUGUAAUUUuuauuuggguaaAGUACACGUUACUGGUACUAGGuac
(((((((((.((.(((((..((((((....))))))))))).)).))))))))).....

Structure

-----         C  G     AU      u 
     UAGUAUCAG AA GUGUA  UUuuau u
     ||||||||| || |||||  ||||||  
     AUCAUGGUC UU CACAU  GAaaug g
cauGG         A  G     --      g 

Annotation confidence High

Genome context

scaffold_4845: 10619176-10619234 [-]

Clustered miRNAs

14 other miRNAs are < 10 kb from der-mir-992-1

Mature der-miR-992-5p

• Accession: MIMAT0039192
• Description: Drosophila erecta der-miR-992-5p mature miRNA
• Sequence: 1 - UAGUAUCAGCAAGGUGUAAUUU - 22
• Evidence: experimental ; Illumina [1]

Mature der-miR-992-3p

• Accession: MIMAT0053350
• Description: Drosophila erecta der-miR-992-3p mature miRNA
• Sequence: 35 - AGUACACGUUACUGGUACUAGG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250