miRBase entry: der-mir-992-1

Stem-loop der-mir-992-1

Accession

MI0030915

Description

Drosophila erecta der-mir-992-1 precursor miRNA

Sequence

UAGUAUCAGCAAGGUGUAAUUuuuauuUGGGUAAAGUACACGUUACUGGUACuagguac
(((((((((.((.(((((..((((((....))))))))))).)).))))))))).....

Structure

-----         C  G     AU      u 
     UAGUAUCAG AA GUGUA  Uuuuau U
     ||||||||| || |||||  ||||||  
     auCAUGGUC UU CACAU  GAAAUG G
caugg         A  G     --      G

Annotation confidence Not enough data

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Genome context

scaffold_4845: 10619176-10619234 [-]

Clustered miRNAs

14 other miRNAs are < 10 kb from der-mir-992-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-992-5p

Accession	MIMAT0039192
Description	Drosophila erecta der-miR-992-5p mature miRNA
Sequence	1 - UAGUAUCAGCAAGGUGUAAUU - 21
Evidence	experimental Illumina [1]

Mature der-miR-992-??

Accession	MIMAT0039193
Description	Drosophila erecta der-miR-992-?? mature miRNA
Sequence	28 - UGGGUAAAGUACACGUUACUGGUAC - 52
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250