Stem-loop der-mir-2498b

Accession

MI0030917

Description

Drosophila erecta der-mir-2498b precursor miRNA

Sequence

45674 reads, 562.0 reads per million, 19 experiments

UUAAGUCUGUUAUGCAUAcuuuugugaguuugacaaAAUGUGCACAACCGGCUUACUG
.((((((.(((.((((((.((((((.......)))))))))))).))).))))))...

Structure

--U      U   A      c      ga 
   UAAGUC GUU UGCAUA uuuugu  g
   |||||| ||| |||||| ||||||  u
   AUUCGG CAA ACGUGU AAaaca  u
GUC      C   C      -      gu 

Annotation confidence High

Genome context

scaffold_4845: 10617479-10617536 [-]

Clustered miRNAs

14 other miRNAs are < 10 kb from der-mir-2498b

Mature der-miR-2498b-5p

• Accession: MIMAT0039196
• Description: Drosophila erecta der-miR-2498b-5p mature miRNA
• Sequence: 1 - UUAAGUCUGUUAUGCAUA - 18
• Evidence: experimental ; Illumina [1]

Mature der-miR-2498b-3p

• Accession: MIMAT0039197
• Description: Drosophila erecta der-miR-2498b-3p mature miRNA
• Sequence: 37 - AAUGUGCACAACCGGCUUACUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250