miRBase entry: der-mir-9691

Stem-loop der-mir-9691

Accession

MI0030919

Description

Drosophila erecta der-mir-9691 precursor miRNA

Sequence

caugauaUGCGAUUCGGAACCAUUCACUGcuguuuuucaauuuucaGUGAAUGAUAUCGAAUGGCUCAuuauuu
.(((((..((.((((((...(((((((((..(((....)))...)))))))))...)))))).))..)))))..

Structure

-c     aU  G      AAC         -cu   u 
  augau  GC AUUCGG   CAUUCACUG   guu u
  |||||  || ||||||   |||||||||   |||  
  uauuA  CG UAAGCU   GUAAGUGac   uaa u
uu     CU  G      AUA         uuu   c

Annotation confidence Not enough data

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Genome context

scaffold_4690: 1633026-1633099 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from der-mir-9691

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-9691-5p

Accession	MIMAT0039199
Description	Drosophila erecta der-miR-9691-5p mature miRNA
Sequence	8 - UGCGAUUCGGAACCAUUCACUG - 29
Evidence	experimental Illumina [1]

Mature der-miR-9691-3p

Accession	MIMAT0039200
Description	Drosophila erecta der-miR-9691-3p mature miRNA
Sequence	47 - GUGAAUGAUAUCGAAUGGCUCA - 68
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250