Stem-loop der-mir-9691

Accession

MI0030919

Description

Drosophila erecta der-mir-9691 precursor miRNA

Sequence

caugauaUGCGAUUCGGAACCAUUCACUGcuguuuuucaauuuucaGUGAAUGAUAUCGAAUGGCUCAuuauuu
.(((((..((.((((((...(((((((((..(((....)))...)))))))))...)))))).))..)))))..

Structure

-c     aU  G      AAC         -cu   u 
  augau  GC AUUCGG   CAUUCACUG   guu u
  |||||  || ||||||   |||||||||   |||  
  uauuA  CG UAAGCU   GUAAGUGac   uaa u
uu     CU  G      AUA         uuu   c 

Annotation confidence Low

Genome context

scaffold_4690: 1633026-1633099 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from der-mir-9691

Mature der-miR-9691-5p

• Accession: MIMAT0039199
• Description: Drosophila erecta der-miR-9691-5p mature miRNA
• Sequence: 8 - UGCGAUUCGGAACCAUUCACUG - 29
• Evidence: experimental ; Illumina [1]

Mature der-miR-9691-3p

• Accession: MIMAT0039200
• Description: Drosophila erecta der-miR-9691-3p mature miRNA
• Sequence: 47 - GUGAAUGAUAUCGAAUGGCUCA - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250