miRBase entry: der-mir-983a

Stem-loop der-mir-983a

Accession

MI0030921

Description

Drosophila erecta der-mir-983a precursor miRNA

Sequence

UUAAUAAUUCGAUUCGAAGUUAugugcuuuaaucauucauaAAUGCGAAACGGAUUAUUAAGu
(((((((((((.((((...(((((.............)))))...)))).)))))))))))..

Structure

--           A    AAG     ugcuu 
  UUAAUAAUUCG UUCG   UUAug     u
  ||||||||||| ||||   |||||     a
  AAUUAUUAGGC AAGC   Aauac     a
uG           A    GUA     uuacu

Annotation confidence Not enough data

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Genome context

scaffold_4690: 1633140-1633202 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from der-mir-983a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-983a-5p

Accession	MIMAT0039201
Description	Drosophila erecta der-miR-983a-5p mature miRNA
Sequence	1 - UUAAUAAUUCGAUUCGAAGUUA - 22
Evidence	experimental Illumina [1]

Mature der-miR-983a-3p

Accession	MIMAT0039202
Description	Drosophila erecta der-miR-983a-3p mature miRNA
Sequence	42 - AAUGCGAAACGGAUUAUUAAG - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250