miRBase entry: der-mir-983b

Stem-loop der-mir-983b

Accession

MI0030922

Description

Drosophila erecta der-mir-983b precursor miRNA

Sequence

UUAAUAAUCCGUUUCGCAUUUAugaaugauuaaagcacauaACUUCGAAUCGAAUUAUUAAAUc
((((((((.((.((((...(((((.............)))))...)))).)).))))))))...

Structure

---        C  U    CAU     aauga 
   UUAAUAAU CG UUCG   UUAug     u
   |||||||| || ||||   |||||     u
   AAUUAUUA GC AAGC   Aauac     a
cUA        A  U    UUC     acgaa

Annotation confidence Not enough data

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Genome context

scaffold_4690: 1633142-1633205 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from der-mir-983b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-983b-5p

Accession	MIMAT0039203
Description	Drosophila erecta der-miR-983b-5p mature miRNA
Sequence	1 - UUAAUAAUCCGUUUCGCAUUUA - 22
Evidence	experimental Illumina [1]

Mature der-miR-983b-3p

Accession	MIMAT0039204
Description	Drosophila erecta der-miR-983b-3p mature miRNA
Sequence	42 - ACUUCGAAUCGAAUUAUUAAAU - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250