Stem-loop der-mir-977

Accession

MI0030926

Description

Drosophila erecta der-mir-977 precursor miRNA

Sequence

125 reads, 1.0 reads per million, 11 experiments

ucaacccaagguauggccUAGAUAACUCGGGUAUCACAUCUuuaugcauucgauaucuggUGAGAUAAUUCACGUUGUCUaaaccauguuuuguaagaaauaa
......((((((((((..((((((((.((((((((................))))))))((((......))))))))))))..))))))))))..........

Structure

----ucaacc          cc        -------------U        ACAUCUu 
          caagguaugg  UAGAUAAC              CGGGUAUC       u
          ||||||||||  ||||||||              ||||||||        
          guuuuguacc  aUCUGUUG              gucuauag       a
aauaaagaau          aa        CACUUAAUAGAGUg        cuuacgu 

Annotation confidence Medium

Genome context

scaffold_4690: 9689075-9689177 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from der-mir-977

Mature der-miR-977-5p

• Accession: MIMAT0039210
• Description: Drosophila erecta der-miR-977-5p mature miRNA
• Sequence: 19 - UAGAUAACUCGGGUAUCACAUCU - 41
• Evidence: experimental ; Illumina [1]

Mature der-miR-977-3p

• Accession: MIMAT0039211
• Description: Drosophila erecta der-miR-977-3p mature miRNA
• Sequence: 61 - UGAGAUAAUUCACGUUGUCU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250