miRBase entry: der-mir-974

Stem-loop der-mir-974

Accession

MI0030928

Description

Drosophila erecta der-mir-974 precursor miRNA

Sequence

AAGCGAGCAAAGAAGUAGUAUUuguguuccaaaagucaaaUAUAACUUUUUUGGAAGCUACGg
.(((...(((((((((.(((((((............))))))).)))))))))...)))....

Structure

---A   GAG         A       uguuc 
    AGC   CAAAGAAGU GUAUUug     c
    |||   ||||||||| |||||||      
    UCG   GUUUUUUCA UAUaaac     a
gGCA   AAG         A       ugaaa

Annotation confidence Not enough data

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Genome context

scaffold_4690: 9682476-9682538 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from der-mir-974

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature der-miR-974-5p

Accession	MIMAT0039214
Description	Drosophila erecta der-miR-974-5p mature miRNA
Sequence	1 - AAGCGAGCAAAGAAGUAGUAUU - 22
Evidence	experimental Illumina [1]

Mature der-miR-974-3p

Accession	MIMAT0039215
Description	Drosophila erecta der-miR-974-3p mature miRNA
Sequence	41 - UAUAACUUUUUUGGAAGCUACG - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250