Stem-loop der-mir-973

Accession

MI0030930

Description

Drosophila erecta der-mir-973 precursor miRNA

Sequence

CGUGGUUGGUGGCUGAACUUAGauuuugaguauucaaauaaaauaaaUCUGUUCAUUCCUCGACACAAGaa
.(((.((((.((.(((((..((((((....(((....)))....)))))))))))..))))))))).....

Structure

----C   G    U  -C     UU      ugag   u 
     GUG UUGG GG  UGAAC  AGauuu    uau c
     ||| |||| ||  |||||  ||||||    |||  
     CAC AGCU CC  ACUUG  UCUaaa    aua a
aaGAA   -    -  UU     --      uaaa   a 

Annotation confidence Low

Genome context

scaffold_4690: 9682325-9682395 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from der-mir-973

Mature der-miR-973-5p

• Accession: MIMAT0039218
• Description: Drosophila erecta der-miR-973-5p mature miRNA
• Sequence: 1 - CGUGGUUGGUGGCUGAACUUAG - 22
• Evidence: experimental ; Illumina [1]

Mature der-miR-973-3p

• Accession: MIMAT0039219
• Description: Drosophila erecta der-miR-973-3p mature miRNA
• Sequence: 48 - UCUGUUCAUUCCUCGACACAAG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250